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Updating performance test to be in sync with previous commit 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5308 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
ebanks 2011-02-24 20:13:35 +00:00
parent 0f1c1fa26f
commit 06e3c34e7f
1 changed files with 0 additions and 2 deletions
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2
java/test/org/broadinstitute/sting/gatk/walkers/indels/IndelRealignerPerformanceTest.java
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@ -18,7 +18,6 @@ public class IndelRealignerPerformanceTest extends WalkerTest {
" -D /humgen/gsa-hpprojects/GATK/data/dbsnp_129_hg18.rod" +
" -I " + evaluationDataLocation + "NA12878.GAII.chr1.50MB.bam" +
" -L chr1:1-5,650,000" +
" --realignReadsWithBadMates" +
" -targetIntervals " + evaluationDataLocation + "NA12878.GAII.chr1.50MB.realigner.intervals",
0,
new ArrayList<String>(0));
@ -33,7 +32,6 @@ public class IndelRealignerPerformanceTest extends WalkerTest {
" -D /humgen/gsa-hpprojects/GATK/data/dbsnp_129_hg18.rod" +
" -I " + evaluationDataLocation + "NA12878.ESP.WEx.chr1.bam" +
" -L chr1:1-150,000,000" +
" --realignReadsWithBadMates" +
" -targetIntervals " + evaluationDataLocation + "NA12878.ESP.WEx.chr1.realigner.intervals",
0,
new ArrayList<String>(0));