From 04d691f04a6fd69a49cf5aabda6b00933f61d0fe Mon Sep 17 00:00:00 2001 From: Guillermo del Angel Date: Mon, 14 May 2012 14:01:29 -0400 Subject: [PATCH] Forgot to update MD5's due to new Exact AF model in pool caller (all changes legit, minor QUAL/QD/SB differences). Fixed bug in VariantsToTable from previous commit --- .../sting/gatk/walkers/variantutils/VariantsToTable.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/VariantsToTable.java b/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/VariantsToTable.java index 8f31f7d4e..55522c3f9 100755 --- a/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/VariantsToTable.java +++ b/public/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/VariantsToTable.java @@ -118,7 +118,7 @@ public class VariantsToTable extends RodWalker { public List fieldsToTake = new ArrayList(); @Hidden - @Argument(fullName="genotypeFields", shortName="GF", doc="The name of each field to capture for output in the table", required=true) + @Argument(fullName="genotypeFields", shortName="GF", doc="The name of each genotype field to capture for output in the table", required=false) public List genotypeFieldsToTake = new ArrayList(); /**