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File reports are now sorted in order 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4447 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
depristo 2010-10-06 21:54:23 +00:00
parent 652a3e8de5
commit 04b4adafda
1 changed files with 4 additions and 1 deletions
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5
python/Verify1KGArchiveBAMs.py
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@ -220,6 +220,9 @@ def printHeaderSep():
print print
print ''.join(['-'] * 80) print ''.join(['-'] * 80)
def sortByName(files):
return sorted(files, key=lambda x: x.file)
if __name__ == "__main__": if __name__ == "__main__":
usage = "usage: %prog -l and/or -a root ftpRoot" usage = "usage: %prog -l and/or -a root ftpRoot"
parser = OptionParser(usage=usage) parser = OptionParser(usage=usage)
@ -272,7 +275,7 @@ if __name__ == "__main__":
print 'SUMMARY: Total files examined', len(results) print 'SUMMARY: Total files examined', len(results)
for status in ['in-sync', 'size-mismatch', 'unknown-local-file', 'local-file-missing', 'orphaned-file']: for status in ['in-sync', 'size-mismatch', 'unknown-local-file', 'local-file-missing', 'orphaned-file']:
printHeaderSep() printHeaderSep()
filesOfStatus = filter(lambda x: x.status == status, results.itervalues()) filesOfStatus = sortByName(filter(lambda x: x.status == status, results.itervalues()))
n = len(filesOfStatus) n = len(filesOfStatus)
print 'SUMMARY: %s' % ( status ) print 'SUMMARY: %s' % ( status )
print 'SUMMARY: Files %d (%.2f%% of total)' % ( n, n * 100.0 / len(results)) print 'SUMMARY: Files %d (%.2f%% of total)' % ( n, n * 100.0 / len(results))