zzh
/
gatk-3.8
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

Contracts for java now enabled by default in GATK build. The contract checking is automatically enabled when running tests and integrationtests. If you want to run the GATK with Contract checking enabled, add -javaagent:lib/cofoja.jar to your jvm args 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5826 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
depristo 2011-05-20 02:53:42 +00:00
parent 6c6e52def9
commit 0095aa2627
1 changed files with 15 additions and 4 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

19
build.xml
View File

@ -31,7 +31,6 @@
<property name="external.dir" value="external" />
<property name="java.source.dir" value="java/src" />
<property name="java.classes" value="${build.dir}/java/classes" />
<property name="java.contracts" value="${build.dir}/java/contracts" />
<property name="resource.file" value="StingText.properties" />
<property name="resource.path" value="${java.classes}/StingText.properties" />
@ -41,7 +40,9 @@
<property name="queue-extensions.source.dir" value="${build.dir}/queue-extensions/src" />
<!-- Contracts for Java -->
<!-- <property name="use.contracts" value="true" /> --> <!-- uncomment out to enable building contracts -->
<!-- uncomment out to enable building contracts -->
<property name="use.contracts" value="true" />
<property name="java.contracts" value="${build.dir}/java/contracts" />
<property name="cofojaDir" value="settings/repository/com.google/"/>
<property name="cofoja.jar" value="${cofojaDir}/cofoja-1.0-r120.jar"/>
@ -604,6 +605,10 @@
<pathelement location="${java.classes}"/>
<pathelement location="lib/testng-5.14.1.jar"/>
</classpath>
<!--
<compilerarg value="-Acom.google.java.contract.debug"/>
<compilerarg value="-Acom.google.java.contract.dump=dump/"/>
-->
</javac>
</target>
@ -670,12 +675,18 @@
<jvmarg value="-Djava.awt.headless=true" />
<jvmarg value="-Dpipeline.run=${pipeline.run}" />
<jvmarg value="-Djava.io.tmpdir=${java.io.tmpdir}" />
<!-- <jvmarg value="-Xdebug"/> -->
<!-- <jvmarg value="-Xrunjdwp:transport=dt_socket,server=y,suspend=y,address=5005"/> -->
<!-- needs to be if -->
<jvmarg value="-javaagent:lib/cofoja.jar"/>
<jvmarg value="-Dcom.google.java.contract.log.contract=false"/>
<!--
<jvmarg value="-Xdebug"/>
<jvmarg value="-Xrunjdwp:transport=dt_socket,server=y,suspend=y,address=5005"/>
-->
<classpath>
<path refid="external.dependencies" />
<pathelement location="${java.classes}" />
<pathelement location="${scala.classes}" />
<pathelement location="${java.contracts}" />
<pathelement location="${java.test.classes}" />
<pathelement location="${scala.test.classes}" />
</classpath>