From 004f5295eac4b74eb1397ad8da52096a4a74aca9 Mon Sep 17 00:00:00 2001
From: fromer <fromer@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Mon, 11 Apr 2011 15:25:39 +0000
Subject: [PATCH] Moved scripts to phasing/scripts sub-directory

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5612 348d0f76-0448-11de-a6fe-93d51630548a
---
 R/phasing/{ => scripts}/play_RBP_theoretical.R                 | 0
 R/phasing/{ => scripts}/plot.intraHetDistancesDistrib.R        | 0
 R/phasing/{ => scripts}/plot.testDepths.R                      | 0
 R/phasing/{ => scripts}/plot.testFragments.R                   | 0
 R/phasing/{ => scripts}/plot.testIntraHetDistances.R           | 0
 R/phasing/{ => scripts}/plot.testReadLengths.R                 | 0
 R/phasing/{ => scripts}/plot.testSpecificDistances.R           | 0
 R/phasing/{ => scripts}/plot.testSpecificFragments.R           | 0
 R/phasing/{ => scripts}/plot.testWindows.R                     | 0
 R/phasing/{ => scripts}/plot.theoretical_window.R              | 0
 R/phasing/{ => scripts}/plot.theoretical_window_on_empirical.R | 0
 R/phasing/{ => scripts}/plot_all.theoretical_and_empirical.R   | 0
 12 files changed, 0 insertions(+), 0 deletions(-)
 rename R/phasing/{ => scripts}/play_RBP_theoretical.R (100%)
 rename R/phasing/{ => scripts}/plot.intraHetDistancesDistrib.R (100%)
 rename R/phasing/{ => scripts}/plot.testDepths.R (100%)
 rename R/phasing/{ => scripts}/plot.testFragments.R (100%)
 rename R/phasing/{ => scripts}/plot.testIntraHetDistances.R (100%)
 rename R/phasing/{ => scripts}/plot.testReadLengths.R (100%)
 rename R/phasing/{ => scripts}/plot.testSpecificDistances.R (100%)
 rename R/phasing/{ => scripts}/plot.testSpecificFragments.R (100%)
 rename R/phasing/{ => scripts}/plot.testWindows.R (100%)
 rename R/phasing/{ => scripts}/plot.theoretical_window.R (100%)
 rename R/phasing/{ => scripts}/plot.theoretical_window_on_empirical.R (100%)
 rename R/phasing/{ => scripts}/plot_all.theoretical_and_empirical.R (100%)

diff --git a/R/phasing/play_RBP_theoretical.R b/R/phasing/scripts/play_RBP_theoretical.R
similarity index 100%
rename from R/phasing/play_RBP_theoretical.R
rename to R/phasing/scripts/play_RBP_theoretical.R
diff --git a/R/phasing/plot.intraHetDistancesDistrib.R b/R/phasing/scripts/plot.intraHetDistancesDistrib.R
similarity index 100%
rename from R/phasing/plot.intraHetDistancesDistrib.R
rename to R/phasing/scripts/plot.intraHetDistancesDistrib.R
diff --git a/R/phasing/plot.testDepths.R b/R/phasing/scripts/plot.testDepths.R
similarity index 100%
rename from R/phasing/plot.testDepths.R
rename to R/phasing/scripts/plot.testDepths.R
diff --git a/R/phasing/plot.testFragments.R b/R/phasing/scripts/plot.testFragments.R
similarity index 100%
rename from R/phasing/plot.testFragments.R
rename to R/phasing/scripts/plot.testFragments.R
diff --git a/R/phasing/plot.testIntraHetDistances.R b/R/phasing/scripts/plot.testIntraHetDistances.R
similarity index 100%
rename from R/phasing/plot.testIntraHetDistances.R
rename to R/phasing/scripts/plot.testIntraHetDistances.R
diff --git a/R/phasing/plot.testReadLengths.R b/R/phasing/scripts/plot.testReadLengths.R
similarity index 100%
rename from R/phasing/plot.testReadLengths.R
rename to R/phasing/scripts/plot.testReadLengths.R
diff --git a/R/phasing/plot.testSpecificDistances.R b/R/phasing/scripts/plot.testSpecificDistances.R
similarity index 100%
rename from R/phasing/plot.testSpecificDistances.R
rename to R/phasing/scripts/plot.testSpecificDistances.R
diff --git a/R/phasing/plot.testSpecificFragments.R b/R/phasing/scripts/plot.testSpecificFragments.R
similarity index 100%
rename from R/phasing/plot.testSpecificFragments.R
rename to R/phasing/scripts/plot.testSpecificFragments.R
diff --git a/R/phasing/plot.testWindows.R b/R/phasing/scripts/plot.testWindows.R
similarity index 100%
rename from R/phasing/plot.testWindows.R
rename to R/phasing/scripts/plot.testWindows.R
diff --git a/R/phasing/plot.theoretical_window.R b/R/phasing/scripts/plot.theoretical_window.R
similarity index 100%
rename from R/phasing/plot.theoretical_window.R
rename to R/phasing/scripts/plot.theoretical_window.R
diff --git a/R/phasing/plot.theoretical_window_on_empirical.R b/R/phasing/scripts/plot.theoretical_window_on_empirical.R
similarity index 100%
rename from R/phasing/plot.theoretical_window_on_empirical.R
rename to R/phasing/scripts/plot.theoretical_window_on_empirical.R
diff --git a/R/phasing/plot_all.theoretical_and_empirical.R b/R/phasing/scripts/plot_all.theoretical_and_empirical.R
similarity index 100%
rename from R/phasing/plot_all.theoretical_and_empirical.R
rename to R/phasing/scripts/plot_all.theoretical_and_empirical.R