gatk-3.8/java/lib/edu/mit/broad/sam/CigarElement.java

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/*
* The Broad Institute
* SOFTWARE COPYRIGHT NOTICE AGREEMENT
* This software and its documentation are copyright 2009 by the
* Broad Institute/Massachusetts Institute of Technology. All rights are reserved.
*
* This software is supplied without any warranty or guaranteed support whatsoever. Neither
* the Broad Institute nor MIT can be responsible for its use, misuse, or functionality.
*/
package edu.mit.broad.sam;
/**
* One component of a cigar string. The component comprises the operator, and the number of bases to which
* the operator applies.
*/
public class CigarElement {
private final int length;
private final CigarOperator operator;
public CigarElement(final int length, final CigarOperator operator) {
this.length = length;
this.operator = operator;
}
public int getLength() {
return length;
}
public CigarOperator getOperator() {
return operator;
}
@Override
public boolean equals(final Object o) {
if (this == o) return true;
if (!(o instanceof CigarElement)) return false;
final CigarElement that = (CigarElement) o;
if (length != that.length) return false;
if (operator != that.operator) return false;
return true;
}
@Override
public int hashCode() {
int result = length;
result = 31 * result + (operator != null ? operator.hashCode() : 0);
return result;
}
}