18 lines
671 B
Java
18 lines
671 B
Java
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package org.broadinstitute.sting.gatk.arguments;
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/**
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* a class we use to determine the merging rules for intervals passed to the GATK
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*/
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public enum IntervalMergingRule {
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ALL, // we merge both overlapping intervals and abutting intervals
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OVERLAPPING_ONLY, // We merge intervals that are overlapping, but NOT ones that only abut each other
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NONE; // we merge neither overlapping or abutting intervals, the list of intervals is sorted, but not merged
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public boolean check() {
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if (this.compareTo(NONE) == 0)
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throw new UnsupportedOperationException("We Currently do not support IntervalMergingRule.NONE");
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return true;
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}
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}
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