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gatk-3.8/PairHMM_JNI/JNI_README

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1. Moved computeLikelihoods from PairHMM to native implementation 2. Disabled debug - debug code still left (hopefully, not part of bytecode) 3. Added directory PairHMM_JNI in the root which holds the C++ library that contains the PairHMM AVX implementation. See PairHMM_JNI/JNI_README first
2014-01-17 13:36:15 +08:00
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