25 lines
815 B
Python
25 lines
815 B
Python
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#!/usr/bin/env python
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import os
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#justPrintCommands = False
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def cmd(cmd_str, farm_queue=False, output_head="", just_print_commands=False):
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# if farm_queue is non-False, submits to queue, other
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if farm_queue:
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farm_stdout = output_head+".stdout"
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cmd_str = "bsub -q "+farm_queue+" -o "+farm_stdout+" "+cmd_str #+" TMP_DIR=/wga/scr1/andrewk/tmp"
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print ">>> Farming via "+cmd_str
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else:
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print ">>> Executing "+cmd_str
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if just_print_commands or (globals().has_key("justPrintCommands") and globals().justPrintCommands):
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return -1
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else:
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# Actually execute the command if we're not just in debugging output mode
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status = os.system(cmd_str)
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if not farm_queue:
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print "<<< Exit code:", status,"\n"
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return status
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