gatk-3.8/java/src/org/broadinstitute/sting/gatk/walkers/PrintReadsWalker.java

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package org.broadinstitute.sting.gatk.walkers;
import net.sf.samtools.SAMRecord;
import org.broadinstitute.sting.gatk.LocusContext;
public class PrintReadsWalker extends ReadWalker<Integer, Integer> {
public Integer map(LocusContext context, SAMRecord read) {
System.out.println(read.format());
return 1;
}
public Integer reduceInit() { return 0; }
public Integer reduce(Integer value, Integer sum) {
return value + sum;
}
}