gatk-3.8/public/java/src/org/broadinstitute/sting/commandline/Argument.java

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/*
* Copyright (c) 2010 The Broad Institute
*
* Permission is hereby granted, free of charge, to any person
* obtaining a copy of this software and associated documentation
* files (the "Software"), to deal in the Software without
* restriction, including without limitation the rights to use,
* copy, modify, merge, publish, distribute, sublicense, and/or sell
* copies of the Software, and to permit persons to whom the
* Software is furnished to do so, subject to the following
* conditions:
*
* The above copyright notice and this permission notice shall be
* included in all copies or substantial portions of the Software.
*
* THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
* EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
* OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
* NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
* HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
* WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
* FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR
* THE USE OR OTHER DEALINGS IN THE SOFTWARE.
*/
package org.broadinstitute.sting.commandline;
import java.lang.annotation.Documented;
import java.lang.annotation.ElementType;
import java.lang.annotation.Inherited;
import java.lang.annotation.Retention;
import java.lang.annotation.RetentionPolicy;
import java.lang.annotation.Target;
/**
* Created by IntelliJ IDEA.
* User: hanna
* Date: Mar 24, 2009
* Time: 11:11:36 AM
*/
/**
* Annotates fields in objects that should be used as command-line arguments.
* Any field annotated with @Argument can appear as a command-line parameter.
*/
@Documented
@Inherited
@Retention(RetentionPolicy.RUNTIME)
@Target(ElementType.FIELD)
public @interface Argument {
/**
* The full name of the command-line argument. Full names should be
* prefixed on the command-line with a double dash (--).
* @return Selected full name, or "" to use the default.
*/
String fullName() default "";
/**
* Specified short name of the command. Short names should be prefixed
* with a single dash. Argument values can directly abut single-char
* short names or be separated from them by a space.
* @return Selected short name, or "" for none.
*/
String shortName() default "";
/**
* Documentation for the command-line argument. Should appear when the
* --help argument is specified.
* @return Doc string associated with this command-line argument.
*/
String doc();
/**
* Is this argument required. If true, the command-line argument system will
* make a best guess for populating this argument based on the type descriptor,
* and will fail if the type can't be populated.
* @return True if the argument is required. False otherwise.
*/
boolean required() default true;
/**
* Should this command-line argument be exclusive of others. Should be
* a comma-separated list of names of arguments of which this should be
* independent.
* @return A comma-separated string listing other arguments of which this
* argument should be independent.
*/
String exclusiveOf() default "";
/**
* Provide a regexp-based validation string.
* @return Non-empty regexp for validation, blank otherwise.
*/
String validation() default "";
}