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Add new 'module' XML tag, that can import modules from supplementary files. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2624 348d0f76-0448-11de-a6fe-93d51630548a
2010-01-19 09:56:04 +08:00
<?xml version="1.0" encoding="UTF-8"?>
Cleanup and formatting overhaul. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2652 348d0f76-0448-11de-a6fe-93d51630548a
2010-01-22 03:22:56 +08:00
<package name="LocalRealignmentAroundIndels">
<executable name="LocalRealignmentAroundIndels">
<main-class name="org.broadinstitute.sting.gatk.CommandLineGATK" />
<resource-bundle file="StingText.properties" />
Add new 'module' XML tag, that can import modules from supplementary files. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2624 348d0f76-0448-11de-a6fe-93d51630548a
2010-01-19 09:56:04 +08:00
<dependencies>
<!-- Local realignment around indels -->
Cleanup and formatting overhaul. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2652 348d0f76-0448-11de-a6fe-93d51630548a
2010-01-22 03:22:56 +08:00
<class name="org.broadinstitute.sting.gatk.walkers.indels.CleanedReadInjector" />
<class name="org.broadinstitute.sting.gatk.walkers.indels.IndelIntervalWalker" />
<class name="org.broadinstitute.sting.gatk.walkers.indels.IntervalCleanerWalker" />
<class name="org.broadinstitute.sting.gatk.walkers.indels.IntervalMergerWalker" />
<class name="org.broadinstitute.sting.gatk.walkers.indels.MismatchIntervalWalker" />
<class name="org.broadinstitute.sting.gatk.walkers.indels.SNPClusterWalker" />
<class name="org.broadinstitute.sting.gatk.walkers.indels.IndelGenotyperWalker" />
<class name="org.broadinstitute.sting.gatk.walkers.indels.IndelGenotyperV2Walker" />
Add new 'module' XML tag, that can import modules from supplementary files. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2624 348d0f76-0448-11de-a6fe-93d51630548a
2010-01-19 09:56:04 +08:00
</dependencies>
</executable>
</package>