gatk-3.8/java/lib/edu/mit/broad/picard/util/Log.java

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/*
* The Broad Institute
* SOFTWARE COPYRIGHT NOTICE AGREEMENT
* This software and its documentation are copyright 2009 by the
* Broad Institute/Massachusetts Institute of Technology. All rights are reserved.
*
* This software is supplied without any warranty or guaranteed support whatsoever. Neither
* the Broad Institute nor MIT can be responsible for its use, misuse, or functionality.
*/
package edu.mit.broad.picard.util;
import java.io.PrintStream;
import java.util.Arrays;
/**
* <p>A <em>wafer thin</em> wrapper around System.out that uses var-args to make it
* much more efficient to call the logging methods in without having to
* surround every call site with calls to Log.isXXXEnabled(). All the methods on this
* class take a variable length list of arguments and, only if logging is enabled for
* the level and channel being logged to, will those arguments be toString()'d and
* appended together.</p>
*
* @author Tim Fennell
*/
public final class Log {
/** Enumeration for setting log levels. */
public static enum LogLevel { ERROR, WARNING, INFO, DEBUG }
private static LogLevel globalLogLevel = LogLevel.DEBUG;
private final Class<?> clazz;
private final String className;
private final LogLevel level = globalLogLevel;
private final PrintStream out = System.out;
/**
* Private constructor
*/
private Log(final Class<?> clazz) {
this.clazz = clazz;
this.className = clazz.getSimpleName();
}
/**
* Get a Log instance to perform logging within the Class specified. Returns an instance
* of this class which wraps an instance of the commons logging Log class.
* @param clazz the Class which is going to be doing the logging
* @return a Log instance with which to log
*/
public static Log getInstance(final Class<?> clazz) {
return new Log(clazz);
}
public static void setGlobalLogLevel(final LogLevel logLevel) {
globalLogLevel = logLevel;
}
/** Returns true if the specified log level is enabled otherwise false. */
public final boolean isEnabled(final LogLevel level) {
return level.ordinal() <= this.level.ordinal();
}
/**
* Private method that does the actual printing of messages to a PrintWriter. Outputs the log level,
* class name and parts followed by the stack trace if a throwable is provided.
*
* @param level the Log level being logged at
* @param throwable a Throwable if one is available otherwise null
* @param parts the parts of the message to be concatenated
*/
private final void emit(final LogLevel level, final Throwable throwable, final Object... parts) {
if (isEnabled(level)) {
this.out.print(level.name());
this.out.print('\t');
this.out.print(this.className);
this.out.print('\t');
for (final Object part : parts) {
if (part != null && part.getClass().isArray()) {
final Class<?> component = part.getClass().getComponentType();
if (component.equals(Boolean.TYPE)) this.out.print(Arrays.toString( (boolean[]) part));
else if (component.equals(Byte.TYPE)) this.out.print(Arrays.toString( (byte[]) part));
else if (component.equals(Character.TYPE)) this.out.print(Arrays.toString( (char[]) part));
else if (component.equals(Double.TYPE)) this.out.print(Arrays.toString( (double[]) part));
else if (component.equals(Float.TYPE)) this.out.print(Arrays.toString( (float[]) part));
else if (component.equals(Integer.TYPE)) this.out.print(Arrays.toString( (int[]) part));
else if (component.equals(Long.TYPE)) this.out.print(Arrays.toString( (long[]) part));
else if (component.equals(Short.TYPE)) this.out.print(Arrays.toString( (short[]) part));
else this.out.print(Arrays.toString( (Object[]) part));
}
else {
this.out.print(part);
}
}
this.out.println();
// Print out the exception if there is one
if (throwable != null) {
throwable.printStackTrace(this.out);
}
}
}
/**
* Logs a Throwable and optional message parts at level error.
* @param throwable an instance of Throwable that should be logged with stack trace
* @param messageParts zero or more objects which should be combined, by calling toString()
* to form the log message.
*/
public final void error(final Throwable throwable, final Object... messageParts) {
emit(LogLevel.ERROR, throwable, messageParts);
}
/**
* Logs a Throwable and optional message parts at level warn.
* @param throwable an instance of Throwable that should be logged with stack trace
* @param messageParts zero or more objects which should be combined, by calling toString()
* to form the log message.
*/
public final void warn(final Throwable throwable, final Object... messageParts) {
emit(LogLevel.WARNING, throwable, messageParts);
}
/**
* Logs a Throwable and optional message parts at level info.
* @param throwable an instance of Throwable that should be logged with stack trace
* @param messageParts zero or more objects which should be combined, by calling toString()
* to form the log message.
*/
public final void info(final Throwable throwable, final Object... messageParts) {
emit(LogLevel.INFO, throwable, messageParts);
}
/**
* Logs a Throwable and optional message parts at level debug.
* @param throwable an instance of Throwable that should be logged with stack trace
* @param messageParts zero or more objects which should be combined, by calling toString()
* to form the log message.
*/
public final void debug(final Throwable throwable, final Object... messageParts) {
emit(LogLevel.DEBUG, throwable, messageParts);
}
// Similar methods, but without Throwables, follow
/**
* Logs one or more message parts at level error.
* @param messageParts one or more objects which should be combined, by calling toString()
* to form the log message.
*/
public final void error(final Object... messageParts) {
emit(LogLevel.ERROR, null, messageParts);
}
/**
* Logs one or more message parts at level warn.
* @param messageParts one or more objects which should be combined, by calling toString()
* to form the log message.
*/
public final void warn(final Object... messageParts) {
emit(LogLevel.WARNING, null, messageParts);
}
/**
* Logs one or more message parts at level info.
* @param messageParts one or more objects which should be combined, by calling toString()
* to form the log message.
*/
public final void info(final Object... messageParts) {
emit(LogLevel.INFO, null, messageParts);
}
/**
* Logs one or more message parts at level debug.
* @param messageParts one or more objects which should be combined, by calling toString()
* to form the log message.
*/
public final void debug(final Object... messageParts) {
emit(LogLevel.DEBUG, null, messageParts);
}
}