2012-06-19 21:47:38 +08:00
|
|
|
##fileformat=VCFv4.1
|
|
|
|
|
##FORMAT=<ID=GQ,Number=1,Type=Float,Description="Genotype Quality">
|
|
|
|
|
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
|
|
|
|
|
##FORMAT=<ID=RD,Number=1,Type=Integer,Description="Read Depth (only filtered reads used for calling)">
|
2012-05-23 04:26:28 +08:00
|
|
|
##source=UnifiedGenotyper
|
|
|
|
|
##reference=human_b36_both.fasta
|
|
|
|
|
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA12878
|
2012-06-19 21:47:38 +08:00
|
|
|
1 10001292 . G A 42.22 . . GT:RD:GQ 1/0:23:19.28
|
|
|
|
|
1 10002963 . C G 42.22 . . GT:RD:GQ 0/1:30:33.07
|
|
|
|
|
1 10005008 rs9 A T 123.78 . . GT:RD:GQ 1/1:30:8.26
|
|
|
|
|
1 10006296 rs12129123 C T 42.23 . . GT:RD:GQ 0/1:7:2.91
|
|
|
|
|
1 10023478 . G C 84.23 . . GT:RD:GQ 1/1:27:4.03
|
|
|
|
|
1 10029362 rs99;rs999 T C 42.22 . . GT:RD:GQ 1/0:44:36.62
|
|
|
|
|
1 10042312 . G C 31.81 . . GT:RD:GQ 1/0:24:5.85
|
|
|
|
|
1 10044557 . C T 42.22 . . GT:RD:GQ 0/1:31:15.01
|
|
|
|
|
1 10045603 . A G 40.26 . . GT:RD:GQ 0/1:15:7.94
|
|
|
|
|
1 10048142 rs9999 A G 126.81 . . GT:RD:GQ 1/1:36:9.14
|
|
|
|
|
1 10048580 . T A 42.22 . . GT:RD:GQ 1/0:33:23.49
|
