gatk-3.8/settings/helpTemplates/generic.index.template.html

<#include "common.html"/>

<#macro emitGroup group>

    <div class="accordion" id="index">
        <div class="accordion-group">
            <div class="accordion-heading">
                <a class="accordion-toggle" data-toggle="collapse" data-parent="#index" href="#${group.id}"><h3>
                    ${group.name}</h3></a>
            </div>
            <div class="accordion-body collapse" id="${group.id}">
                <div class="accordion-inner">
                    <p class="lead">${group.summary}

                    <p>
                        <#if group.id == "GATKwalkers">
                            <h3>Categories</h3>
                            <@getCategories map=categories filter="GATK walkers" />
                            <#else>
                                <table class="table table-striped table-bordered table-condensed">
                                    <tr>
                                        <th>Name</th>
                                        <th>Summary</th>
                                    </tr>
                                    <#list data as datum>
                                        <#if datum.group == group.name>
                                            <tr>
                                                <td><a href="${datum.filename}">${datum.name}</a></td>
                                                <td>${datum.summary}</td>
                                            </tr>
                                        </#if>
                                    </#list>
                                </table>
                        </#if>
                </div>
            </div>
        </div>
    </div>
</#macro>

<@makeHeader title="GATK documentation index" isIndex=true />
<h1>GATK documentation index
<small>${version}</small></h1>
<hr>
<#list groups?sort_by("name") as group>
    <@emitGroup group=group/>
</#list>

<@footerInfo />
<@pageFooter />