gatk-3.8/settings/repository/org.reflections/reflections-0.9.5-svnversio...

<ivy-module version="1.0">
    <info organisation="org.reflections" module="reflections" revision="0.9.5-svnversion79M_mod2" status="release" />
    <dependencies defaultconf="default">
        <dependency org="javassist" name="javassist" rev="3.8.0.GA"/>
        <dependency org="ch.qos.logback" name="logback-core" rev="0.9.9"/>
        <dependency org="ch.qos.logback" name="logback-classic" rev="0.9.9"/>
        <dependency org="org.slf4j" name="slf4j-api" rev="1.5.6"/>
        <dependency org="xml-apis" name="xml-apis" rev="1.0.b2"/>
        <dependency org="com.google.collections" name="google-collections" rev="1.0"/>
        <dependency org="dom4j" name="dom4j" rev="1.6"/>
    </dependencies>
</ivy-module>
Switched to Reflections (http://code.google.com/p/reflections/) project for inspecting the source tree and loading walkers, rather than trying to roll our own by hand. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1286 348d0f76-0448-11de-a6fe-93d51630548a 2009-07-22 02:32:22 +08:00			`<ivy-module version="1.0">`
updating the reflections library; Matt found a problem where the reflections library doesn't sort out non-java objects from the classpath (affects only OS X so far). I'll push back the changes to the reflections library people. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3307 348d0f76-0448-11de-a6fe-93d51630548a 2010-05-06 10:08:41 +08:00			`<info organisation="org.reflections" module="reflections" revision="0.9.5-svnversion79M_mod2" status="release" />`
Changed logging level to default at INFO instead of WARN. Changes to StingUtils command line for use in Queue, replacing Queue's use of property files. Updates to walkers used in existing QScripts to add @Input/@Output. RMD used in @Required/@Allows now has a new default equal to "any" type. New QueueGATKExtensions.jar generator for auto wrapping walkers as Queue CommandLineFunctions. Added hooks to modify the functions that perform the Scattering and Gathering (setting their jar files, other arguments, etc.) Removed dependency on BroadCore by porting LSF job submitter to scala. Ivy now pulls down module dependencies from maven. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3984 348d0f76-0448-11de-a6fe-93d51630548a 2010-08-10 00:42:48 +08:00			`<dependencies defaultconf="default">`
			`<dependency org="javassist" name="javassist" rev="3.8.0.GA"/>`
			`<dependency org="ch.qos.logback" name="logback-core" rev="0.9.9"/>`
			`<dependency org="ch.qos.logback" name="logback-classic" rev="0.9.9"/>`
			`<dependency org="org.slf4j" name="slf4j-api" rev="1.5.6"/>`
			`<dependency org="xml-apis" name="xml-apis" rev="1.0.b2"/>`
			`<dependency org="com.google.collections" name="google-collections" rev="1.0"/>`
			`<dependency org="dom4j" name="dom4j" rev="1.6"/>`
			`</dependencies>`
Switched to Reflections (http://code.google.com/p/reflections/) project for inspecting the source tree and loading walkers, rather than trying to roll our own by hand. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1286 348d0f76-0448-11de-a6fe-93d51630548a 2009-07-22 02:32:22 +08:00			`</ivy-module>`