32 lines
617 B
Python
32 lines
617 B
Python
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#!/usr/bin/env python
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import sys
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dinuc_root = sys.argv[1]
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fout = file(dinuc_root+".log_reg_params", "w")
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fout.write("p,q\t")
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for p in range(5):
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for q in range(5):
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fout.write("%d,%d\t" % (p,q))
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fout.write("\n")
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for dinuc in ("AA","AC","AG","AT","CA","CC","CG","CT","GA","GC","GG","GT","TA","TC","TG","TT"):
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dinin = open(dinuc_root+"."+dinuc+".parameters")
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dinin.readline()
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params = []
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for line in dinin:
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line.rstrip("\n")
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params.extend(map(float, line.split()))
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fout.write(dinuc+"\t")
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fout.write("\t".join(map(str, params)))
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fout.write("\n")
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