python ~/dev/GenomeAnalysisTK/trunk/python/MergeBAMBatch.py -d /humgen/gsa-hphome1/projects/1kg_pilot1/mergedBamsByPopulation/ -q gsa /broad/1KG/DCC_merged/lists/low_coverage_freeze5.list -n /broad/1KG/DCC_merged/lists/naids_and_pop.txt
python ~/dev/GenomeAnalysisTK/trunk/python/MergeBAMBatch.py -d freeze5.1 -q gsa -s /broad/1KG/DCC_merged/lists/trios_freeze5.list

