19 lines
865 B
Bash
Executable File
19 lines
865 B
Bash
Executable File
#time ./bwa mem -t 12 -M -R @RG\\tID:normal\\tSM:normal\\tPL:illumina\\tLB:normal\\tPG:bwa \
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# /home/zzh/data/reference/human_g1k_v37_decoy.fasta \
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# /home/zzh/data/fastq/nm1.fq \
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# /home/zzh/data/fastq/nm2.fq -o /dev/null
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#time ./bwa mem -t 12 -M -R @RG\\tID:normal\\tSM:normal\\tPL:illumina\\tLB:normal\\tPG:bwa \
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# /home/zzh/data/reference/human_g1k_v37_decoy.fasta \
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# /mnt/d/data/fastq/ZY2105177532213000/ZY2105177532213010_L4_1.fq.gz \
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# /mnt/d/data/fastq/ZY2105177532213000/ZY2105177532213010_L4_2.fq.gz \
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# -o /dev/null
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time ./bwa mem -t 12 -M -R @RG\\tID:normal\\tSM:normal\\tPL:illumina\\tLB:normal\\tPG:bwa \
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/home/zzh/data/reference/human_g1k_v37_decoy.fasta \
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/mnt/d/data/fastq/ZY2105177532213000/ZY2105177532213030_L3_1.fq.gz \
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/mnt/d/data/fastq/ZY2105177532213000/ZY2105177532213030_L3_2.fq.gz \
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-o /dev/null
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