Commit Graph

10 Commits (e9e5ee6a3d1a0d185b74a250c7353b79646a5436)

Author SHA1 Message Date
Heng Li a19ab654df no effective change 2013-02-23 14:21:19 -05:00
Heng Li dd85c528d6 an alternative bwt_invPsi() implementation
Cleaner, but not necessarily faster.
2013-02-23 13:59:18 -05:00
Heng Li 91debf412b move smem iterators to bwamem.{c,h} 2013-01-31 13:59:48 -05:00
Heng Li 5a4a0c4173 a bit refactoring for further changes 2013-01-31 12:34:05 -05:00
Heng Li 6641788d38 preparation for further changes 2013-01-31 11:42:31 -05:00
Heng Li 150bfbdef4 fixed a deadlock; SMEM iterator 2011-11-24 19:15:14 -05:00
Heng Li f56edd07dd forward-backward search seems working 2011-10-25 12:31:36 -04:00
Heng Li 22c2252e15 added bidirectional bwt; seems buggy 2011-10-25 00:22:28 -04:00
Heng Li c948c647a0 make changes to bwt.c 2011-10-19 17:42:42 -04:00
Heng Li 007c3eb75d Imported from my local bwa repository, the master repository. 2011-01-13 20:52:12 -05:00