53 Commits (d58beeee56d2ee9b6b4f0f7eb2396d0337aa85fb)

Author	SHA1	Message	Date
Heng Li	1cef219667	compute CIGAR; rev seq not working	2012-04-07 22:00:03 -04:00
Heng Li	66154ff5d2	towards refined gapped; unfinished	2012-04-07 01:25:39 -04:00
Heng Li	a1abfe9977	API: aln seems working	2012-04-07 00:23:01 -04:00