Heng Li
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ba18db1a9f
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sw extension works for the simplest case
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2013-02-04 12:37:38 -05:00 |
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Heng Li
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d25a87cc50
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code backup
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2013-02-02 15:14:24 -05:00 |
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Heng Li
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00e5302219
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routine to get subsequence from 2-bit pac
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2013-02-01 16:39:50 -05:00 |
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Heng Li
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7ab4b3321f
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bugfix: memory leak
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2013-02-01 15:26:34 -05:00 |
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Heng Li
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f8f3b7577a
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code cleanup; added a missing file
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2013-02-01 14:38:44 -05:00 |
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Heng Li
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620ad6e5b9
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reseed long SMEMs
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2013-02-01 14:20:38 -05:00 |
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Heng Li
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5d372cef65
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bugfix: wrong B-tree comparison
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2013-01-31 16:39:24 -05:00 |
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Heng Li
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8977737460
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basic chaining working
Definitely suboptimal in a lot of corner cases...
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2013-01-31 16:26:05 -05:00 |
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Heng Li
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6c19c9640c
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code backup
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2013-01-31 15:55:22 -05:00 |
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Heng Li
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91debf412b
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move smem iterators to bwamem.{c,h}
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2013-01-31 13:59:48 -05:00 |