Commit Graph

7 Commits (9dfb9708dba9e100db1b30c7c9caae1fb898e84c)

Author SHA1 Message Date
Jacob Pfeil 9dfb9708db Add -M option to bwakit 2016-11-09 11:36:55 -08:00
Heng Li 2c078eb667 option to skip ALT 2016-03-16 16:06:49 -04:00
Heng Li d7ce7e1395 hs38D1=>hs38DH; cmd help for run-gen-ref 2014-12-23 11:48:59 -05:00
Heng Li c05a721f28 improved doc and don't type HLA by default 2014-12-21 00:12:11 -05:00
Heng Li d58beeee56 smarter about path finding 2014-11-19 12:38:55 -05:00
Heng Li 9ade171f7a transfer read groups from the input BAM 2014-11-19 11:43:59 -05:00
Heng Li 15c93e7a52 renamed extras to bwakit for clarity 2014-11-19 10:37:03 -05:00