Heng Li
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5a0b32bfd2
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updated to the latest kseq.h
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2013-02-06 14:38:40 -05:00 |
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Heng Li
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91debf412b
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move smem iterators to bwamem.{c,h}
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2013-01-31 13:59:48 -05:00 |
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Heng Li
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1cef219667
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compute CIGAR; rev seq not working
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2012-04-07 22:00:03 -04:00 |
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Heng Li
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a1abfe9977
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API: aln seems working
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2012-04-07 00:23:01 -04:00 |
Heng Li
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182cb2e89c
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use standard SW when no SSE2
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2011-11-19 19:38:21 -05:00 |
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Heng Li
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c8c79ef024
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mate rescue seems working (not MT)
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2011-11-06 16:20:40 -05:00 |
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Heng Li
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17eaac5a21
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compute insert size distribution
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2011-11-05 23:17:52 -04:00 |
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Heng Li
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f56edd07dd
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forward-backward search seems working
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2011-10-25 12:31:36 -04:00 |
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Heng Li
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22c2252e15
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added bidirectional bwt; seems buggy
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2011-10-25 00:22:28 -04:00 |
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Heng Li
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b96f180a15
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move bwt_gen/* to the root directory
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2011-10-20 11:56:24 -04:00 |
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Heng Li
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007c3eb75d
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Imported from my local bwa repository, the master repository.
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2011-01-13 20:52:12 -05:00 |