Commit Graph

169 Commits (7e1466c8856b4490d4f962766d28ae4fc6742bfe)

Author SHA1 Message Date
Heng Li 243e735431 applied patches from Alec Wysoker 2011-05-04 09:46:50 -04:00
Heng Li 4d064c69ce added -s to ar 2011-05-04 09:41:30 -04:00
Heng Li 8d6b859bf8 speed up multi-threading 2011-04-07 17:26:08 -04:00
Heng Li 87664941b0 Release bwa-0.5.9 (r16) 2011-01-24 22:00:24 -05:00
Heng Li 7fd8948689 Added recommendation for PacBio reads 2011-01-22 13:20:11 -05:00
Heng Li dac5395126 fixed a typo in help 2011-01-21 23:56:18 -05:00
Heng Li 0380cf02bf update the manual page 2011-01-18 23:27:55 -05:00
Heng Li 1d7d8be9e8 Put BC: to both ends 2011-01-18 20:16:57 -05:00
Heng Li 51d354cd28 Added barcode support 2011-01-15 15:35:39 -05:00
Heng Li 10721ca602 Added an option to accept Illumina 1.3+ fastq 2011-01-15 14:07:08 -05:00
Heng Li f335b33624 fixed a bug in bwase: no RG for unmapped read pairs 2011-01-15 10:32:45 -05:00
Heng Li 5b362b8718 Updated README 2011-01-13 21:38:37 -05:00
Heng Li f85533c3c7 Updated README 2011-01-13 21:28:26 -05:00
Heng Li ac93bbc6e4 Provided links to help information 2011-01-13 21:19:02 -05:00
Heng Li 94122ad6ee Added a few others to .gitignore 2011-01-13 21:14:00 -05:00
Heng Li fbedf6370b Added .gitignore 2011-01-13 21:12:42 -05:00
Heng Li 5e30884730 Update to the latest modfication 0.5.9rc1-2. Update ChangeLog 2011-01-13 20:54:10 -05:00
Heng Li 007c3eb75d Imported from my local bwa repository, the master repository. 2011-01-13 20:52:12 -05:00
Heng Li 58628ff263 first commit 2011-01-13 20:42:51 -05:00