Commit Graph

14 Commits (6c1a1137539ca806bebe147c9be0effdf5f4ba4c)

Author SHA1 Message Date
Heng Li 292f9061ab r132: optionally copy FASTA/Q comment to SAM 2012-10-26 12:54:32 -04:00
Heng Li f44edd4fc9 r128: more conservative chaining filter 2012-06-28 14:51:02 -04:00
Heng Li cd818687ac r115: added -I and -S to bwasw 2012-04-17 20:43:43 -04:00
Heng Li 173b93dfd4 debugging code: bwasw has a rare bug 2012-04-02 09:37:02 -04:00
Heng Li bdc953cad9 Tim's suggestion suffix file name with .64 2012-03-29 12:22:51 -04:00
Heng Li 9f84384ed2 reordering BWA-SW command-line prompt 2011-11-23 23:36:08 -05:00
Heng Li b17b6577ac removed a useless bwa-sw CMD option 2011-11-23 23:30:14 -05:00
Heng Li 06687a33b9 bwasw: read and align two fastq at a time 2011-11-05 14:00:01 -04:00
Heng Li 4c43c5914d this is better; but still buggy 2011-10-24 11:50:11 -04:00
Heng Li 29c3acfb31 not segfault immediately; but buggy 2011-10-24 09:36:52 -04:00
Heng Li 7fd8948689 Added recommendation for PacBio reads 2011-01-22 13:20:11 -05:00
Heng Li dac5395126 fixed a typo in help 2011-01-21 23:56:18 -05:00
Heng Li 5e30884730 Update to the latest modfication 0.5.9rc1-2. Update ChangeLog 2011-01-13 20:54:10 -05:00
Heng Li 007c3eb75d Imported from my local bwa repository, the master repository. 2011-01-13 20:52:12 -05:00