Commit Graph

8 Commits (6ba11ab68cd42763e4fe2911210f5f04211b785d)

Author SHA1 Message Date
Heng Li c875085b2b do not use .64 suffix by default 2012-03-29 12:31:01 -04:00
Heng Li bdc953cad9 Tim's suggestion suffix file name with .64 2012-03-29 12:22:51 -04:00
Heng Li dec584d50b fixed a long-existing bug in trimming 2011-11-23 23:11:50 -05:00
Heng Li 1cb409aaf2 use forward-only pac to reduce memory 2011-10-21 12:03:14 -04:00
Heng Li 66629512d9 more carefully computed the availableWords 2011-10-20 23:49:03 -04:00
Heng Li 46123639cf removed reverse pac; bwa is not working right now 2011-10-20 12:09:35 -04:00
Heng Li 72563c38f3 automatically choose the algorithm for BWT 2011-06-09 17:33:25 -04:00
Heng Li 007c3eb75d Imported from my local bwa repository, the master repository. 2011-01-13 20:52:12 -05:00