305 Commits (4260699a09fcae7a3a0b979dbffa69192e514bff)

Author	SHA1	Message	Date
Heng Li	51d354cd28	Added barcode support	2011-01-15 15:35:39 -05:00
Heng Li	10721ca602	Added an option to accept Illumina 1.3+ fastq	2011-01-15 14:07:08 -05:00
Heng Li	f335b33624	fixed a bug in bwase: no RG for unmapped read pairs	2011-01-15 10:32:45 -05:00
Heng Li	5e30884730	Update to the latest modfication 0.5.9rc1-2. Update ChangeLog	2011-01-13 20:54:10 -05:00
Heng Li	007c3eb75d	Imported from my local bwa repository, the master repository.	2011-01-13 20:52:12 -05:00