Commit Graph

56 Commits (338ebfaae05ca5de9eb9a78efd862793575a6c5f)

Author SHA1 Message Date
Heng Li 13288e2dcd code backup 2013-02-12 09:22:47 -05:00
Heng Li dcb190069a PE NOT working, yet 2013-02-11 16:10:14 -05:00
Heng Li 99907c98fb separated and improved SAM printing code
This is for the PE mode. The routines may also be useful for bwa-sw, but
probably I won't change the old code.
2013-02-11 15:29:03 -05:00
Heng Li b6006cbe9d skip orientations that are much smaller than best 2013-02-11 13:44:39 -05:00
Heng Li 4431e359e2 analyze isize distribution 2013-02-11 12:15:12 -05:00
Heng Li 59eaf650ac code backup 2013-02-11 10:59:38 -05:00