Commit Graph

10 Commits (2a41772d0a94e08e2467281cea4cc2242c5c0dc0)

Author SHA1 Message Date
Heng Li 2a41772d0a more command line help 2014-11-04 15:41:18 -05:00
Heng Li e5d7f4fc30 change the default max_len 2014-11-04 15:31:33 -05:00
Heng Li ccf03ffd22 control min-match-length
we still need this to kill false mapping/alignment
2014-11-04 15:26:10 -05:00
Heng Li de268247db type primary exons first and then the rest 2014-11-04 15:09:21 -05:00
Heng Li 12fff1ad57 a bit code cleanup 2014-11-04 14:30:31 -05:00
Heng Li 96fba0f2f4 proper homozygous typing; fixed a low-level bug 2014-11-04 11:38:05 -05:00
Heng Li ace18171b0 backup 2014-11-04 10:07:14 -05:00
Heng Li 9dbf152e31 added the pipeline script 2014-11-03 15:16:14 -05:00
Heng Li 40c4a6ffe1 better CLI; more comments 2014-11-03 12:09:29 -05:00
Heng Li b7d0a2d537 first HLA typing script 2014-11-03 11:47:23 -05:00