Commit Graph

11 Commits (17eaac5a2151c3d48e885abba26860a2dd6ec80b)

Author SHA1 Message Date
Heng Li 7664795ffb fixed a minor issue about +/-1 2011-10-25 13:00:41 -04:00
Heng Li aabb807734 concatenate for-rev sequences in the end 2011-10-25 11:22:08 -04:00
Heng Li 7b4266a6e5 bugfix: integer overflow and strand error in sampe 2011-10-24 17:07:12 -04:00
Heng Li 1cb409aaf2 use forward-only pac to reduce memory 2011-10-21 12:03:14 -04:00
Heng Li ec307a10e6 PE seems working; more testing needed 2011-10-20 17:45:41 -04:00
Heng Li 243e735431 applied patches from Alec Wysoker 2011-05-04 09:46:50 -04:00
Heng Li 51d354cd28 Added barcode support 2011-01-15 15:35:39 -05:00
Heng Li 10721ca602 Added an option to accept Illumina 1.3+ fastq 2011-01-15 14:07:08 -05:00
Heng Li f335b33624 fixed a bug in bwase: no RG for unmapped read pairs 2011-01-15 10:32:45 -05:00
Heng Li 5e30884730 Update to the latest modfication 0.5.9rc1-2. Update ChangeLog 2011-01-13 20:54:10 -05:00
Heng Li 007c3eb75d Imported from my local bwa repository, the master repository. 2011-01-13 20:52:12 -05:00