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fast-bwa
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Merge branch 'dev'

This commit is contained in:
Heng Li 2016-05-03 11:29:43 -04:00
parent 6b9be61666 7ec3261877
commit fe545f6ad5
2 changed files with 2 additions and 2 deletions
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2
bwa.c
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@ -381,7 +381,7 @@ void bwa_print_sam_hdr(const bntseq_t *bns, const char *hdr_line)
if (n_SQ == 0) { if (n_SQ == 0) {
for (i = 0; i < bns->n_seqs; ++i) { for (i = 0; i < bns->n_seqs; ++i) {
err_printf("@SQ\tSN:%s\tLN:%d", bns->anns[i].name, bns->anns[i].len); err_printf("@SQ\tSN:%s\tLN:%d", bns->anns[i].name, bns->anns[i].len);
if (bns->anns[i].is_alt) err_printf("\tAH:Y\n"); if (bns->anns[i].is_alt) err_printf("\tAH:*\n");
else err_fputc('\n', stdout); else err_fputc('\n', stdout);
} }
} else if (n_SQ != bns->n_seqs && bwa_verbose >= 2) } else if (n_SQ != bns->n_seqs && bwa_verbose >= 2)

2
main.c
View File

@ -4,7 +4,7 @@
#include "utils.h" #include "utils.h"
#ifndef PACKAGE_VERSION #ifndef PACKAGE_VERSION
#define PACKAGE_VERSION "0.7.13-r1130-dirty" #define PACKAGE_VERSION "0.7.13-r1134-dirty"
#endif #endif
int bwa_fa2pac(int argc, char *argv[]); int bwa_fa2pac(int argc, char *argv[]);