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emphasize pacbio and nanopore

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Heng Li 2017-11-06 19:51:01 -05:00
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[![SourceForge Downloads](https://img.shields.io/sourceforge/dt/bio-bwa.svg)](https://sourceforge.net/projects/bio-bwa/files/?source=navbar) [![SourceForge Downloads](https://img.shields.io/sourceforge/dt/bio-bwa.svg)](https://sourceforge.net/projects/bio-bwa/files/?source=navbar)
[![GitHub Downloads](https://img.shields.io/github/downloads/lh3/bwa/total.svg?style=flat)](https://github.com/lh3/bwa/releases) [![GitHub Downloads](https://img.shields.io/github/downloads/lh3/bwa/total.svg?style=flat)](https://github.com/lh3/bwa/releases)
**Note: [minimap2][minimap2] has replaced BWA-MEM for PacBio and Nanopore read **Note: [minimap2][minimap2] has replaced BWA-MEM for __PacBio and Nanopore__ read
alignment.** It retains all major BWA-MEM features, but is ~50 times as fast, alignment.** It retains all major BWA-MEM features, but is ~50 times as fast,
more versatile, more accurate and produces better base-level alignment. more versatile, more accurate and produces better base-level alignment.