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Merge pull request #292 from nh13/patch-1 

Document "-u"
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Heng Li 2022-03-06 18:16:09 -05:00 committed by GitHub
parent 4d8fb2ca91 9cbbd6bf94
commit e679702118
1 changed files with 1 additions and 0 deletions
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fastmap.c
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@ -313,6 +313,7 @@ int main_mem(int argc, char *argv[])
fprintf(stderr, " specify the mean, standard deviation (10%% of the mean if absent), max\n"); fprintf(stderr, " specify the mean, standard deviation (10%% of the mean if absent), max\n");
fprintf(stderr, " (4 sigma from the mean if absent) and min of the insert size distribution.\n"); fprintf(stderr, " (4 sigma from the mean if absent) and min of the insert size distribution.\n");
fprintf(stderr, " FR orientation only. [inferred]\n"); fprintf(stderr, " FR orientation only. [inferred]\n");
fprintf(stderr, " -u output XB instead of XA; XB is XA with the alignment score added.\n");
fprintf(stderr, "\n"); fprintf(stderr, "\n");
fprintf(stderr, "Note: Please read the man page for detailed description of the command line and options.\n"); fprintf(stderr, "Note: Please read the man page for detailed description of the command line and options.\n");
fprintf(stderr, "\n"); fprintf(stderr, "\n");