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fast-bwa
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修改一下索引文件后缀名称

This commit is contained in:
zzh 2024-04-02 07:50:22 +08:00
parent 123aceb6a6
commit dd7db7beb6
1 changed files with 6 additions and 6 deletions
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12
bwa.c
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@ -454,12 +454,12 @@ FMTIndex *bwa_idx_load_fmt(const char *hint)
kmer_idx_fn = malloc(l_hint + 32);
//kmer_bit_fn = malloc(l_hint + 32);
sa_fn = malloc(l_hint + 32);
sprintf(suffix, ".256.%d.fmt", FMT_MID_INTERVAL);
// sprintf(suffix, ".fmt");
// sprintf(suffix, ".256.%d.fmt", FMT_MID_INTERVAL);
sprintf(suffix, ".fmt");
strcpy(fmt_idx_fn, hint);
strcpy(fmt_idx_fn + l_hint, suffix);
sprintf(suffix, ".%d.kmer", HASH_KMER_LEN);
// sprintf(suffix, ".kmer");
// sprintf(suffix, ".%d.kmer", HASH_KMER_LEN);
sprintf(suffix, ".kmer");
strcpy(kmer_idx_fn, hint);
strcpy(kmer_idx_fn + l_hint, suffix);
@ -474,8 +474,8 @@ FMTIndex *bwa_idx_load_fmt(const char *hint)
fmt->kmer_hash = fmt_restore_kmer_idx(kmer_idx_fn);
strcpy(sa_fn, hint);
sprintf(suffix, ".33.%d.sa", SA_INTV);
// sprintf(suffix, ".bytesa");
// sprintf(suffix, ".33.%d.sa", SA_INTV);
sprintf(suffix, ".bytesa");
strcpy(sa_fn + l_hint, suffix); // partial suffix array (SA)
fmt_restore_sa(sa_fn, fmt);