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r906: don't reduce non-ALT mapQ by default

This commit is contained in:
Heng Li 2014-10-16 15:15:23 -04:00
parent e318d8e7e5
commit d8d8b230d1
2 changed files with 2 additions and 2 deletions
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2
bwamem.c
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@ -79,7 +79,7 @@ mem_opt_t *mem_opt_init()
o->min_chain_weight = 0;
o->max_chain_extend = 1<<30;
o->mapQ_coef_len = 50; o->mapQ_coef_fac = log(o->mapQ_coef_len);
o->min_pa_ratio = 0.8;
o->min_pa_ratio = 0;
bwa_fill_scmat(o->a, o->b, o->mat);
return o;
}

2
main.c
View File

@ -4,7 +4,7 @@
#include "utils.h"
#ifndef PACKAGE_VERSION
#define PACKAGE_VERSION "0.7.10-r905-dirty"
#define PACKAGE_VERSION "0.7.10-r906-dirty"
#endif
int bwa_fa2pac(int argc, char *argv[]);