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Removed a comment on hs38 lacking EBV 

as is pointed out by Martin Pollard
This commit is contained in:
Heng Li 2014-11-17 11:08:07 -05:00
parent bf053c779b
commit ad9d12c04d
1 changed files with 0 additions and 1 deletions
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extras/run-gen-ref
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@ -17,7 +17,6 @@ elif [ $1 == "hs38a" ]; then
wget -O- $url38 | gzip -dc > $1.fa
[ ! -f $1.fa.alt ] && grep _alt $root/resource-GRCh38/hs38d6.fa.alt > $1.fa.alt
elif [ $1 == "hs38" ]; then
# we don't use GCA_000001405.15_GRCh38_no_alt_analysis_set.fna.gz because it lacks EBV
wget -O- $url38 | gzip -dc | awk '/^>/{f=/_alt/?0:1}f' > $1.fa
elif [ $1 == "hs37d5" ]; then
wget -O- $url37d5 | gzip -dc > $1.fa 2>/dev/null