Release bwa-0.7.6a-r433
This commit is contained in:
parent
5fdab3ae13
commit
7c50bad567
5
bwa.c
5
bwa.c
|
|
@ -128,8 +128,9 @@ uint32_t *bwa_gen_cigar(const int8_t mat[25], int q, int r, int w_, int64_t l_pa
|
|||
int k, x, y, u, n_mm = 0, n_gap = 0;
|
||||
str.l = str.m = *n_cigar * 4; str.s = (char*)cigar; // append MD to CIGAR
|
||||
for (k = 0, x = y = u = 0; k < *n_cigar; ++k) {
|
||||
int op = cigar[k]&0xf;
|
||||
int len = cigar[k]>>4;
|
||||
int op, len;
|
||||
cigar = (uint32_t*)str.s;
|
||||
op = cigar[k]&0xf, len = cigar[k]>>4;
|
||||
if (op == 0) { // match
|
||||
for (i = 0; i < len; ++i) {
|
||||
if (query[x + i] != rseq[y + i]) {
|
||||
|
|
|
|||
Loading…
Reference in New Issue