zzh
/
fast-bwa
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

Merge branch 'dev'

This commit is contained in:
Heng Li 2016-02-23 11:17:21 -05:00
parent 5ecdc66e46 b94a78adbf
commit 67aa1ca731
1 changed files with 29 additions and 0 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

29
NEWS.md
View File

@ -1,3 +1,32 @@
Release 0.7.13 (23 Feburary 2016)
---------------------------------
This release fixes a few minor bugs in the previous version and adds a few
minor features. All BWA algorithms should produce identical output to 0.7.12
when there are no ALT contigs.
Detailed changes:
* Fixed a bug in "bwa-postalt.js". The old version may produce 0.5% of wrong
bases for reads mapped to the ALT contigs.
* Fixed a potential bug in the multithreading mode. It may occur when mapping
is much faster than file reading, which should almost never happen in
practice.
* Changed the download URL of GRCh38.
* Removed the read overlap mode. It is not working well.
* Added the ropebwt2 algorithm as an alternative to index large genomes.
Ropebwt2 is slower than the "bwtsw" algorithm, but it has a permissive
license. This allows us to create an Apache2-licensed BWA (in the "Apache2"
branch) for commercial users who are concerned with GPL.
(0.7.13: 23 Feburary 2016, r1118)
Release 0.7.12 (28 December 2014)
---------------------------------