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Merge pull request #293 from nh13/patch-2 

Output mapping quality with XB
This commit is contained in:
Heng Li 2022-03-06 18:18:45 -05:00 committed by GitHub
parent e679702118 f717ea1318
commit 5d250d35de
1 changed files with 2 additions and 0 deletions
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2
bwamem_extra.c
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@ -155,6 +155,8 @@ char **mem_gen_alt(const mem_opt_t *opt, const bntseq_t *bns, const uint8_t *pac
if (opt->flag & MEM_F_XB) {
kputc(',', &str);
kputw(t.score, &str);
kputc(',', &str);
kputw(t.mapq, &str);
}
kputc(';', &str);
free(t.cigar);