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change to debugging code only

This commit is contained in:
Heng Li 2013-03-04 11:52:11 -05:00
parent 7e00dbcac5
commit 40f1214736
1 changed files with 1 additions and 1 deletions
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bwamem.c
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@ -513,7 +513,7 @@ void mem_chain2aln(const mem_opt_t *opt, int64_t l_pac, const uint8_t *pac, int
if (gscore <= 0 || gscore <= a->score - opt->pen_clip) a->qe = qe + qle, a->re = rmax[0] + re + tle;
else a->qe = l_query, a->re = rmax[0] + re + gtle;
} else a->qe = l_query, a->re = s->rbeg + s->len;
if (bwa_verbose >= 4) printf("[%d] score=%d\t[%d,%d) <=> [%ld,%ld)\n", k, a->score, a->qb, a->qe, (long)a->rb, (long)a->re);
if (bwa_verbose >= 4) { printf("[%d] score=%d\t[%d,%d) <=> [%ld,%ld)\n", k, a->score, a->qb, a->qe, (long)a->rb, (long)a->re); fflush(stdout); }
// compute seedcov
for (i = 0, a->seedcov = 0; i < c->n; ++i) {