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further code clean up

This commit is contained in:
Heng Li 2011-10-18 16:41:44 -04:00
parent d2f357af3a
commit 3114edcb7c
2 changed files with 0 additions and 3 deletions
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1
bwt_gen/bwt_gen.c
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@ -306,7 +306,6 @@ BWTInc *BWTIncCreate(const unsigned int textLength, const float targetNBit,
bwtInc->packedShift[i] = BITS_IN_WORD - (i+1) * BIT_PER_CHAR; bwtInc->packedShift[i] = BITS_IN_WORD - (i+1) * BIT_PER_CHAR;
} }
bwtInc->targetTextLength = textLength;
bwtInc->availableWord = (unsigned int)((textLength + OCC_INTERVAL - 1) / OCC_INTERVAL * OCC_INTERVAL / BITS_IN_WORD * bwtInc->targetNBit); bwtInc->availableWord = (unsigned int)((textLength + OCC_INTERVAL - 1) / OCC_INTERVAL * OCC_INTERVAL / BITS_IN_WORD * bwtInc->targetNBit);
if (bwtInc->availableWord < BWTResidentSizeInWord(textLength) + BWTOccValueMinorSizeInWord(textLength)) { if (bwtInc->availableWord < BWTResidentSizeInWord(textLength) + BWTOccValueMinorSizeInWord(textLength)) {
fprintf(stderr, "BWTIncCreate() : targetNBit is too low!\n"); fprintf(stderr, "BWTIncCreate() : targetNBit is too low!\n");

2
bwt_gen/bwt_gen.h
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@ -72,7 +72,6 @@ typedef struct BWT {
unsigned int bwtSizeInWord; // Temporary variable to hold the memory allocated unsigned int bwtSizeInWord; // Temporary variable to hold the memory allocated
unsigned int occSizeInWord; // Temporary variable to hold the memory allocated unsigned int occSizeInWord; // Temporary variable to hold the memory allocated
unsigned int occMajorSizeInWord; // Temporary variable to hold the memory allocated unsigned int occMajorSizeInWord; // Temporary variable to hold the memory allocated
unsigned int saIndexRangeSize; // Temporary variable to hold the memory allocated
} BWT; } BWT;
typedef struct BWTInc { typedef struct BWTInc {
@ -80,7 +79,6 @@ typedef struct BWTInc {
unsigned int numberOfIterationDone; unsigned int numberOfIterationDone;
unsigned int *cumulativeCountInCurrentBuild; unsigned int *cumulativeCountInCurrentBuild;
unsigned int availableWord; unsigned int availableWord;
unsigned int targetTextLength;
float targetNBit; float targetNBit;
unsigned int buildSize; unsigned int buildSize;
unsigned int initialMaxBuildSize; unsigned int initialMaxBuildSize;