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fast-bwa
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This commit is contained in:
Heng Li 2011-10-20 16:15:16 -04:00
parent 2d2db5d50f
commit 156852b1dd
1 changed files with 0 additions and 1 deletions
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bwtaln.c
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@ -162,7 +162,6 @@ void bwa_aln_core(const char *prefix, const char *fn_fa, const gap_opt_t *opt)
ks = bwa_open_reads(opt->mode, fn_fa); ks = bwa_open_reads(opt->mode, fn_fa);
{ // load BWT { // load BWT
extern uint8_t nst_nt4_table[];
char *str = (char*)calloc(strlen(prefix) + 10, 1); char *str = (char*)calloc(strlen(prefix) + 10, 1);
strcpy(str, prefix); strcat(str, ".bwt"); bwt = bwt_restore_bwt(str); strcpy(str, prefix); strcat(str, ".bwt"); bwt = bwt_restore_bwt(str);
free(str); free(str);