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r765: fixed a declaration error 

Reported by Andreas Tile from Debian
This commit is contained in:
Heng Li 2014-05-13 12:54:23 -04:00
parent 08517ac09b
commit 0168f39eeb
4 changed files with 4 additions and 4 deletions
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2
Makefile
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@ -1,6 +1,6 @@
CC= gcc CC= gcc
#CC= clang --analyze #CC= clang --analyze
CFLAGS= -g -Wall -Wno-unused-function -O2 CFLAGS= -g -Wall -Wextra -Wno-unused-function -O2
WRAP_MALLOC=-DUSE_MALLOC_WRAPPERS WRAP_MALLOC=-DUSE_MALLOC_WRAPPERS
AR= ar AR= ar
DFLAGS= -DHAVE_PTHREAD $(WRAP_MALLOC) DFLAGS= -DHAVE_PTHREAD $(WRAP_MALLOC)

2
README.md
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@ -93,7 +93,7 @@ settings:
####Why does a read appear multiple times in the output SAM? ####Why does a read appear multiple times in the output SAM?
BWA-SW and BWA-MEM perform local alignments. BWA-SW and BWA-MEM perform local alignments.
####How to map sequences to GRCh38 with ALT contigs? ####How to map sequences to GRCh38 with ALT contigs?

2
bwt_lite.c
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@ -7,7 +7,7 @@
# include "malloc_wrap.h" # include "malloc_wrap.h"
#endif #endif
int is_sa(const uint8_t *T, uint32_t *SA, int n); int is_sa(const uint8_t *T, int *SA, int n);
int is_bwt(uint8_t *T, int n); int is_bwt(uint8_t *T, int n);
bwtl_t *bwtl_seq2bwtl(int len, const uint8_t *seq) bwtl_t *bwtl_seq2bwtl(int len, const uint8_t *seq)

2
main.c
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@ -4,7 +4,7 @@
#include "utils.h" #include "utils.h"
#ifndef PACKAGE_VERSION #ifndef PACKAGE_VERSION
#define PACKAGE_VERSION "0.7.8-r764-dirty" #define PACKAGE_VERSION "0.7.8-r765-dirty"
#endif #endif
int bwa_fa2pac(int argc, char *argv[]); int bwa_fa2pac(int argc, char *argv[]);