r765: fixed a declaration error
Reported by Andreas Tile from Debian
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2
Makefile
2
Makefile
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@ -1,6 +1,6 @@
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CC= gcc
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#CC= clang --analyze
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CFLAGS= -g -Wall -Wno-unused-function -O2
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CFLAGS= -g -Wall -Wextra -Wno-unused-function -O2
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WRAP_MALLOC=-DUSE_MALLOC_WRAPPERS
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AR= ar
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DFLAGS= -DHAVE_PTHREAD $(WRAP_MALLOC)
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@ -93,7 +93,7 @@ settings:
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####Why does a read appear multiple times in the output SAM?
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BWA-SW and BWA-MEM perform local alignments.
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BWA-SW and BWA-MEM perform local alignments.
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####How to map sequences to GRCh38 with ALT contigs?
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@ -7,7 +7,7 @@
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# include "malloc_wrap.h"
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#endif
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int is_sa(const uint8_t *T, uint32_t *SA, int n);
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int is_sa(const uint8_t *T, int *SA, int n);
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int is_bwt(uint8_t *T, int n);
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bwtl_t *bwtl_seq2bwtl(int len, const uint8_t *seq)
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