53 Commits (d6e8e5929bab4c4a5e97d7e11cea65c01bd1766c)

Author	SHA1	Message	Date
Heng Li	1cef219667	compute CIGAR; rev seq not working	2012-04-07 22:00:03 -04:00
Heng Li	66154ff5d2	towards refined gapped; unfinished	2012-04-07 01:25:39 -04:00
Heng Li	a1abfe9977	API: aln seems working	2012-04-07 00:23:01 -04:00