Rob Davies
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3d33ab063e
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Merge branch 'master' into master_fixes
Merged to master version b621d3a
Conflicts:
Makefile
bntseq.c
bwa.c
bwase.c
bwaseqio.c
bwtaln.c
bwtindex.c
bwtio.c
bwtmisc.c
bwtsw2_aux.c
cs2nt.c
fastmap.c
khash.h
kseq.h
ksw.c
kvec.h
simple_dp.c
utils.c
utils.h
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2013-03-01 09:37:46 +00:00 |
Heng Li
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99907c98fb
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separated and improved SAM printing code
This is for the PE mode. The routines may also be useful for bwa-sw, but
probably I won't change the old code.
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2013-02-11 15:29:03 -05:00 |
|
Heng Li
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1fd51fc3f7
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code backup
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2013-02-07 14:36:18 -05:00 |
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Rob Davies
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b081ac9b8b
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Use wrapper functions to catch system errors
Use the wrapper functions in utils.c plus a few extra bits of error
checking code to catch system errors and exit non-zero when they occur.
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2012-12-16 10:34:57 +00:00 |
Heng Li
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007c3eb75d
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Imported from my local bwa repository, the master repository.
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2011-01-13 20:52:12 -05:00 |