From f21d6498bc7799cc3aac95c0eaee082244f51601 Mon Sep 17 00:00:00 2001 From: Heng Li Date: Fri, 2 May 2014 16:49:19 -0400 Subject: [PATCH] r748: reduced the default -m to 50 --- bwamem.c | 2 +- main.c | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/bwamem.c b/bwamem.c index 7ac9bf8..00e0cc1 100644 --- a/bwamem.c +++ b/bwamem.c @@ -68,7 +68,7 @@ mem_opt_t *mem_opt_init() o->chunk_size = 10000000; o->n_threads = 1; o->max_hits = 10; - o->max_matesw = 100; + o->max_matesw = 50; o->mask_level_redun = 0.95; o->min_chain_weight = 0; o->max_chain_extend = 1<<30; diff --git a/main.c b/main.c index aa210dd..3505ce7 100644 --- a/main.c +++ b/main.c @@ -4,7 +4,7 @@ #include "utils.h" #ifndef PACKAGE_VERSION -#define PACKAGE_VERSION "0.7.8-r747-dirty" +#define PACKAGE_VERSION "0.7.8-r748-dirty" #endif int bwa_fa2pac(int argc, char *argv[]);