From e5d7f4fc301f85dcf165574cd5704f36c9f9aa4d Mon Sep 17 00:00:00 2001
From: Heng Li <lh3@me.com>
Date: Tue, 4 Nov 2014 15:31:33 -0500
Subject: [PATCH] change the default max_len

---
 bwa-typeHLA.js | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/bwa-typeHLA.js b/bwa-typeHLA.js
index ce10087..fa35199 100644
--- a/bwa-typeHLA.js
+++ b/bwa-typeHLA.js
@@ -47,7 +47,7 @@ var getopt = function(args, ostr) {
  *** Main function ***
  *********************/
 
-var c, thres_len = 100, thres_ratio = .8, thres_nm = 5;
+var c, thres_len = 50, thres_ratio = .8, thres_nm = 5;
 
 // parse command line options
 while ((c = getopt(arguments, "l:d:")) != null) {