zzh
/
bwa
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

r758: fixed a typo 

mostly negligible in practice
This commit is contained in:
Heng Li 2014-05-07 15:07:29 -04:00
parent e56572e88f
commit c9b33502f3
2 changed files with 3 additions and 3 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

4
bwamem.c
View File

@ -196,12 +196,12 @@ int mem_chain_weight(const mem_chain_t *c)
else if (s->qbeg + s->len > end) w += s->qbeg + s->len - end; else if (s->qbeg + s->len > end) w += s->qbeg + s->len - end;
end = end > s->qbeg + s->len? end : s->qbeg + s->len; end = end > s->qbeg + s->len? end : s->qbeg + s->len;
} }
tmp = w; tmp = w; w = 0;
for (j = 0, end = 0; j < c->n; ++j) { for (j = 0, end = 0; j < c->n; ++j) {
const mem_seed_t *s = &c->seeds[j]; const mem_seed_t *s = &c->seeds[j];
if (s->rbeg >= end) w += s->len; if (s->rbeg >= end) w += s->len;
else if (s->rbeg + s->len > end) w += s->rbeg + s->len - end; else if (s->rbeg + s->len > end) w += s->rbeg + s->len - end;
end = end > s->qbeg + s->len? end : s->qbeg + s->len; end = end > s->rbeg + s->len? end : s->rbeg + s->len;
} }
w = w < tmp? w : tmp; w = w < tmp? w : tmp;
return w < 1<<30? w : (1<<30)-1; return w < 1<<30? w : (1<<30)-1;

2
main.c
View File

@ -4,7 +4,7 @@
#include "utils.h" #include "utils.h"
#ifndef PACKAGE_VERSION #ifndef PACKAGE_VERSION
#define PACKAGE_VERSION "0.7.8-r754-dirty" #define PACKAGE_VERSION "0.7.8-r758-dirty"
#endif #endif
int bwa_fa2pac(int argc, char *argv[]); int bwa_fa2pac(int argc, char *argv[]);